Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU73244.1 | EAU73245.1 | RS9916_27074 | RS9916_27079 | Hypothetical protein; COG0629 Single-stranded DNA-binding protein. | COG2099 Precorrin-6x reductase. | 0.620 |
EAU73244.1 | EAU73246.1 | RS9916_27074 | RS9916_27084 | Hypothetical protein; COG0629 Single-stranded DNA-binding protein. | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | 0.600 |
EAU73245.1 | EAU73244.1 | RS9916_27079 | RS9916_27074 | COG2099 Precorrin-6x reductase. | Hypothetical protein; COG0629 Single-stranded DNA-binding protein. | 0.620 |
EAU73245.1 | EAU73246.1 | RS9916_27079 | RS9916_27084 | COG2099 Precorrin-6x reductase. | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | 0.800 |
EAU73246.1 | EAU73244.1 | RS9916_27084 | RS9916_27074 | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | Hypothetical protein; COG0629 Single-stranded DNA-binding protein. | 0.600 |
EAU73246.1 | EAU73245.1 | RS9916_27084 | RS9916_27079 | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | COG2099 Precorrin-6x reductase. | 0.800 |
EAU73246.1 | EAU74211.1 | RS9916_27084 | RS9916_31927 | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | COG0492 Thioredoxin reductase. | 0.498 |
EAU73246.1 | EAU74564.1 | RS9916_27084 | RS9916_33692 | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.884 |
EAU74211.1 | EAU73246.1 | RS9916_31927 | RS9916_27084 | COG0492 Thioredoxin reductase. | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | 0.498 |
EAU74564.1 | EAU73246.1 | RS9916_33692 | RS9916_27084 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | COG1324 Uncharacterized protein involved in tolerance to divalent cations. | 0.884 |