STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU74808.1Predicted membrane protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (512 aa)    
Predicted Functional Partners:
EAU72963.1
COG0642 Signal transduction histidine kinase.
   
 0.822
EAU74003.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.713
EAU74001.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; COG0765 ABC-type amino acid transport system, permease component.
  
 0.671
EAU72788.1
COG0067 Glutamate synthase domain 1.
     
 0.655
EAU74807.1
Sodium bile acid symporter family protein; COG0385 Predicted Na+-dependent transporter.
       0.580
EAU74394.1
Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.550
EAU73999.1
ABC transporter for amino acids, membrane component; COG4597 ABC-type amino acid transport system, permease component.
  
 
 0.525
hflX
Putative GTP-binding protein, transport associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
 
   
 0.485
psbA-2
Photosystem q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
       0.471
EAU74534.1
Putative multidrug efflux ABC transporter; COG1131 ABC-type multidrug transport system, ATPase component.
    
 0.447
Your Current Organism:
Synechococcus sp. RS9916
NCBI taxonomy Id: 221359
Other names: S. sp. RS9916
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