STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU75430.1Transcriptional regulator, GntR family protein; COG1725 Predicted transcriptional regulators. (329 aa)    
Predicted Functional Partners:
EAU74258.1
Hypothetical protein.
  
     0.713
EAU74938.1
Hypothetical protein.
  
     0.713
EAU72863.1
Hypothetical protein; COG2205 Osmosensitive K+ channel histidine kinase.
  
     0.645
EAU75429.1
COG1045 Serine acetyltransferase.
       0.626
EAU74057.1
Hypothetical protein.
  
     0.610
EAU75431.1
Possible carboxymethylenebutenolidase; COG0412 Dienelactone hydrolase and related enzymes.
       0.586
EAU73728.1
Hypothetical protein.
  
     0.583
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.566
EAU74650.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.552
EAU74472.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Synechococcus sp. RS9916
NCBI taxonomy Id: 221359
Other names: S. sp. RS9916
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.