STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcT-3Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (198 aa)    
Predicted Functional Partners:
EAU72915.1
Possible phycobilisome polypeptide; COG0177 Predicted EndoIII-related endonuclease.
 
   
 0.908
EAU72884.1
R-phycocyanin II beta chain; COG0465 ATP-dependent Zn proteases.
  
  
 0.902
EAU72880.1
Putative phycocyanobilin lyase alpha and beta fusion protein; COG1413 FOG: HEAT repeat.
  
  
 0.895
EAU72883.1
R-phycocyanin II alpha chain.
  
  
 0.895
cpcS-2
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.892
EAU74756.1
Allophycocyanin, beta subunit.
  
  
 0.879
EAU72914.1
Possible phycobilisome rod-core linker polypeptide (L-RC 28.5); Belongs to the phycobilisome linker protein family.
 
     0.865
EAU74755.1
Allophycocyanin alpha chain.
  
   
 0.859
EAU74754.1
Anchor polypeptide LCM; Belongs to the phycobilisome linker protein family.
  
  
 0.820
EAU72910.1
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 0.819
Your Current Organism:
Synechococcus sp. RS9916
NCBI taxonomy Id: 221359
Other names: S. sp. RS9916
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.