STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ68627.1Putative sarcosine-dimethylglycine methyltransferase; COG0500 SAM-dependent methyltransferases. (284 aa)    
Predicted Functional Partners:
EAQ68626.1
Putative glycine-sarcosine methyltransferase; COG0500 SAM-dependent methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. Glycine N-methyltransferase family.
  
 0.995
gcvP
Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.780
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.642
EAQ68624.1
ABC transporter, glycine betaine/proline family, membrane component; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
     0.480
EAQ68625.1
ABC transporter, ATP binding component, glycine betaine/proline family protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
     0.479
EAQ68623.1
ABC transporter binding protein, glycine betaine/proline family protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
     0.478
Your Current Organism:
Synechococcus sp. RS9917
NCBI taxonomy Id: 221360
Other names: S. sp. RS9917
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