STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ69532.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
EAQ69531.1
Putative inner membrane protein; COG0706 Preprotein translocase subunit YidC.
 
     0.793
EAQ69533.1
Bacterial ribonuclease P protein component of ribozyme; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.788
EAQ68633.1
Photosystem II manganese-stabilizing polypeptide.
  
     0.772
psb27
Possible photosystem II Psb27 protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.772
EAQ69066.1
Hypothetical protein.
  
     0.772
EAQ69745.1
Hypothetical protein.
  
     0.771
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.771
EAQ68878.1
Putative photosystem II oxygen-evolving complex 23K protein PsbP.
  
     0.770
EAQ69227.1
Hypothetical protein.
  
     0.770
psb28
Putative photosystem II reaction center Psb28 protein; COG0137 Argininosuccinate synthase; Belongs to the Psb28 family.
  
     0.769
Your Current Organism:
Synechococcus sp. RS9917
NCBI taxonomy Id: 221360
Other names: S. sp. RS9917
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.