Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS0402 | focA | MS0402 | MS0400 | Unknown. | FocA protein; Formate/nitrite family of transporters. | 0.518 |
MS0402 | pflA | MS0402 | MS0403 | Unknown. | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.584 |
MS0402 | pflD | MS0402 | MS0401 | Unknown. | PflD protein; Pyruvate-formate lyase. | 0.727 |
focA | MS0402 | MS0400 | MS0402 | FocA protein; Formate/nitrite family of transporters. | Unknown. | 0.518 |
focA | pflA | MS0400 | MS0403 | FocA protein; Formate/nitrite family of transporters. | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.485 |
focA | pflD | MS0400 | MS0401 | FocA protein; Formate/nitrite family of transporters. | PflD protein; Pyruvate-formate lyase. | 0.675 |
pflA | MS0402 | MS0403 | MS0402 | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Unknown. | 0.584 |
pflA | focA | MS0403 | MS0400 | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | FocA protein; Formate/nitrite family of transporters. | 0.485 |
pflA | pflD | MS0403 | MS0401 | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | PflD protein; Pyruvate-formate lyase. | 0.988 |
pflD | MS0402 | MS0401 | MS0402 | PflD protein; Pyruvate-formate lyase. | Unknown. | 0.727 |
pflD | focA | MS0401 | MS0400 | PflD protein; Pyruvate-formate lyase. | FocA protein; Formate/nitrite family of transporters. | 0.675 |
pflD | pflA | MS0401 | MS0403 | PflD protein; Pyruvate-formate lyase. | PflA protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.988 |