STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppC-2DppC protein; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (295 aa)    
Predicted Functional Partners:
oppF-2
OppF protein; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 0.996
dppD-2
DppD protein; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.976
dppB-2
DppB protein; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.969
oppA-2
OppA protein; ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
 
  
 0.954
dppD-3
DppD protein; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
     0.879
dppD
DppD protein; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
     0.825
oppF-3
OppF protein; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
     0.819
oppA-4
OppA protein; ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
 
  
 0.787
dppB-3
DppB protein; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.782
dppB
DppB protein; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.781
Your Current Organism:
Mannheimia succiniciproducens
NCBI taxonomy Id: 221988
Other names: Mannheimia succiniciproducens MBEL55E, Mannheimia succiniciproducens str. MBEL55E, [. succiniciproducens MBEL55E, [Mannheimia] succiniciproducens MBEL55E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.