STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntKGntK protein; Gluconate kinase. (171 aa)    
Predicted Functional Partners:
gnd
Gnd protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.993
nagB
NagB protein; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
 
 0.935
MS0684
Unknown; Gluconolactonase.
    
 0.915
rpiA
RpiA protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.841
fabG-3
FabG protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.732
gntT-4
GntT protein; H+/gluconate symporter and related permeases.
 
  
 0.606
gntT-5
GntT protein; H+/gluconate symporter and related permeases.
 
  
 0.602
tdh-2
Tdh protein; Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
 0.538
Your Current Organism:
Mannheimia succiniciproducens
NCBI taxonomy Id: 221988
Other names: Mannheimia succiniciproducens MBEL55E, Mannheimia succiniciproducens str. MBEL55E, [. succiniciproducens MBEL55E, [Mannheimia] succiniciproducens MBEL55E
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