STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecB-2FecB protein; ABC-type Fe3+-siderophores transport systems, periplasmic components. (282 aa)    
Predicted Functional Partners:
btuC-4
BtuC protein; ABC-type cobalamin/Fe3+-siderophores transport systems, permease components; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
fepC-3
FepC protein; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 0.996
mdlB-5
MdlB protein; ABC-type multidrug/protein/lipid transport system, ATPase component.
 
    0.929
cirA-3
CirA protein; Outer membrane receptor proteins, mostly Fe transport.
 
   
 0.909
btuC-3
BtuC protein; ABC-type cobalamin/Fe3+-siderophores transport systems, permease components; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.813
fepC-2
FepC protein; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
 
 0.764
MS1200
Unknown.
       0.564
cirA-4
CirA protein; Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.474
MS1905
Unknown; Predicted hydrolases of the HAD superfamily.
 
     0.442
grxC
GrxC protein; Glutaredoxin and related proteins.
  
     0.433
Your Current Organism:
Mannheimia succiniciproducens
NCBI taxonomy Id: 221988
Other names: Mannheimia succiniciproducens MBEL55E, Mannheimia succiniciproducens str. MBEL55E, [. succiniciproducens MBEL55E, [Mannheimia] succiniciproducens MBEL55E
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