STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrgBLrgB protein; Putative effector of murein hydrolase. (227 aa)    
Predicted Functional Partners:
MS1271
Unknown; Putative effector of murein hydrolase LrgA.
 
  
 0.990
dgt
dGTP triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
       0.795
murG
MurG protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
      
 0.623
glmS
GlmS protein; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
      
 0.606
glmS-2
GlmS protein; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains.
      
 0.606
MS1272
Unknown; Micrococcal nuclease (thermonuclease) similarity.
       0.566
csdB
CsdB protein; Selenocysteine lyase.
       0.557
MS1274
Unknown; SufE protein probably involved in Fe-S center assembly.
       0.556
Your Current Organism:
Mannheimia succiniciproducens
NCBI taxonomy Id: 221988
Other names: Mannheimia succiniciproducens MBEL55E, Mannheimia succiniciproducens str. MBEL55E, [. succiniciproducens MBEL55E, [Mannheimia] succiniciproducens MBEL55E
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