STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS2090Unknown. (284 aa)    
Predicted Functional Partners:
acrA-4
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
   0.813
marR
MarR protein; Transcriptional regulators.
     
 0.778
mdlB-3
MdlB protein; ABC-type multidrug/protein/lipid transport system, ATPase component.
  
  
 0.671
appB
AppB protein; Cytochrome bd-type quinol oxidase, subunit 2.
  
  
 0.648
cydA
CydA protein; Cytochrome bd-type quinol oxidase, subunit 1.
  
  
 0.557
MS2086
Unknown.
       0.508
acrB-2
AcrB protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.508
lysR-16
LysR protein; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.505
MS0897
Unknown.
  
     0.471
MS2065
Unknown.
  
     0.426
Your Current Organism:
Mannheimia succiniciproducens
NCBI taxonomy Id: 221988
Other names: Mannheimia succiniciproducens MBEL55E, Mannheimia succiniciproducens str. MBEL55E, [. succiniciproducens MBEL55E, [Mannheimia] succiniciproducens MBEL55E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.