Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANV97914.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
ANV97506.1
Hexapeptide transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.926
ANV97913.1
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
lysS
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.863
ANV97447.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.796
ANV97912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.766
ANV97911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
ANV97915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.741
ANV97905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.707
ANV97910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
ANV97909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.553
Your Current Organism:
Helicobacter sp. MIT016242
NCBI taxonomy Id: 222136
Other names: H. sp. MIT 01-6242, Helicobacter sp. MIT 01-6242
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