STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374165_03811Unannotated protein. (706 aa)    
Predicted Functional Partners:
GCA_000374165_03810
Unannotated protein.
       0.842
GCA_000374165_02254
Unannotated protein.
 
   
 0.828
GCA_000374165_03812
Unannotated protein.
       0.820
GCA_000374165_02918
Unannotated protein.
 
  
 0.814
GCA_000374165_02252
Unannotated protein.
 
  
 0.808
GCA_000374165_02916
Unannotated protein.
 
   
 0.805
GCA_000374165_02253
Unannotated protein.
 
   
 0.794
GCA_000374165_02256
Unannotated protein.
  
     0.578
GCA_000374165_02879
Unannotated protein.
   
 
 0.508
GCA_000374165_00358
Unannotated protein.
   
 
 0.506
Your Current Organism:
Frankia elaeagni
NCBI taxonomy Id: 222534
Other names: CECT 9031, DSM 46783, F. elaeagni, Frankia elaeagni Nouioui et al. 2016, Frankia sp. BMG5.12, strain BMG5.12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.