STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374165_04526Unannotated protein. (386 aa)    
Predicted Functional Partners:
GCA_000374165_04272
Unannotated protein.
  
 
 0.726
GCA_000374165_04273
Unannotated protein.
  
 
 0.644
GCA_000374165_03706
Unannotated protein.
  
 
 0.624
GCA_000374165_04541
Unannotated protein.
 
 
 0.555
GCA_000374165_04538
Unannotated protein.
 
  
 0.546
GCA_000374165_04527
Unannotated protein.
       0.532
GCA_000374165_00546
Unannotated protein.
 
 
 0.517
GCA_000374165_00550
Unannotated protein.
  
  
 0.487
GCA_000374165_04048
Unannotated protein.
 
 0.477
GCA_000374165_00537
Unannotated protein.
 
 
 0.475
Your Current Organism:
Frankia elaeagni
NCBI taxonomy Id: 222534
Other names: CECT 9031, DSM 46783, F. elaeagni, Frankia elaeagni Nouioui et al. 2016, Frankia sp. BMG5.12, strain BMG5.12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.