STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374165_04580Unannotated protein. (67 aa)    
Predicted Functional Partners:
GCA_000374165_03814
Unannotated protein.
  
 0.853
GCA_000374165_05401
Unannotated protein.
  
 0.853
GCA_000374165_04018
Unannotated protein.
   
 
 0.742
GCA_000374165_06129
Unannotated protein.
    
 0.720
GCA_000374165_02465
Unannotated protein.
    
  0.716
GCA_000374165_04567
Unannotated protein.
    
  0.716
GCA_000374165_03994
Unannotated protein.
   
   0.703
GCA_000374165_05201
Unannotated protein.
     
 0.679
GCA_000374165_06101
Unannotated protein.
   
 
 0.675
GCA_000374165_04015
Unannotated protein.
   
  
 0.672
Your Current Organism:
Frankia elaeagni
NCBI taxonomy Id: 222534
Other names: CECT 9031, DSM 46783, F. elaeagni, Frankia elaeagni Nouioui et al. 2016, Frankia sp. BMG5.12, strain BMG5.12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.