STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS90395.1DinB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)    
Predicted Functional Partners:
AOS90397.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.865
AOS90396.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.858
AOS90400.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.709
AOS90399.1
decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.700
AOS90398.1
Arabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
embC
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
embB
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
APD83839.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
APD84462.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.508
AOS92787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
Your Current Organism:
Mycobacterium chimaera
NCBI taxonomy Id: 222805
Other names: CCUG 50989, CIP 107892, DSM 44623, JCM 14737, M. chimaera, Mycobacterium chimaera Tortoli et al. 2004, NCTC 13781, personal::FI-01069, strain FI-01069
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