NSE_0413 protein (Neorickettsia sennetsu) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

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Score

NSE_0413

HIT domain protein; Identified by match to protein family HMM PF01230. (117 aa)

Predicted Functional Partners:

rpoC

0.817

rpoZ

0.813

rpoA

0.807

rpoB

0.804

NSE_0414

0.620

NSE_0661

0.537

xth

0.457

NSE_0304

0.450

prs

0.449

leuS

0.443

Your Current Organism:

Neorickettsia sennetsu

NCBI taxonomy Id: 222891
Other names: N. sennetsu str. Miyayama, Neorickettsia sennetsu Miyayama, Neorickettsia sennetsu str. Miyayama

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NSE_0304	NSE_0413	NSE_0304	NSE_0413	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	HIT domain protein; Identified by match to protein family HMM PF01230.	0.450
NSE_0304	NSE_0661	NSE_0304	NSE_0661	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	0.677
NSE_0304	rpoA	NSE_0304	NSE_0289	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.504
NSE_0413	NSE_0304	NSE_0413	NSE_0304	HIT domain protein; Identified by match to protein family HMM PF01230.	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	0.450
NSE_0413	NSE_0414	NSE_0413	NSE_0414	HIT domain protein; Identified by match to protein family HMM PF01230.	Hypothetical protein; Identified by Glimmer2; putative.	0.620
NSE_0413	NSE_0661	NSE_0413	NSE_0661	HIT domain protein; Identified by match to protein family HMM PF01230.	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	0.537
NSE_0413	leuS	NSE_0413	NSE_0506	HIT domain protein; Identified by match to protein family HMM PF01230.	leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.443
NSE_0413	prs	NSE_0413	NSE_0816	HIT domain protein; Identified by match to protein family HMM PF01230.	Ribose-phosphate pyrophosphokinase; Identified by similarity to SP:P08330; match to protein family HMM PF00156; match to protein family HMM TIGR01251.	0.449
NSE_0413	rpoA	NSE_0413	NSE_0289	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.807
NSE_0413	rpoB	NSE_0413	NSE_0678	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.804
NSE_0413	rpoC	NSE_0413	NSE_0677	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.817
NSE_0413	rpoZ	NSE_0413	NSE_0039	HIT domain protein; Identified by match to protein family HMM PF01230.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.813
NSE_0413	xth	NSE_0413	NSE_0415	HIT domain protein; Identified by match to protein family HMM PF01230.	Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.457
NSE_0414	NSE_0413	NSE_0414	NSE_0413	Hypothetical protein; Identified by Glimmer2; putative.	HIT domain protein; Identified by match to protein family HMM PF01230.	0.620
NSE_0414	xth	NSE_0414	NSE_0415	Hypothetical protein; Identified by Glimmer2; putative.	Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.535
NSE_0661	NSE_0304	NSE_0661	NSE_0304	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	Rrf2/aminotransferase, class V family protein; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082; match to protein family HMM TIGR00738.	0.677
NSE_0661	NSE_0413	NSE_0661	NSE_0413	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	HIT domain protein; Identified by match to protein family HMM PF01230.	0.537
NSE_0661	leuS	NSE_0661	NSE_0506	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.545
NSE_0661	prs	NSE_0661	NSE_0816	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	Ribose-phosphate pyrophosphokinase; Identified by similarity to SP:P08330; match to protein family HMM PF00156; match to protein family HMM TIGR01251.	0.596
NSE_0661	rpoA	NSE_0661	NSE_0289	FAD-binding domain protein; Identified by similarity to PIR:E97700; match to protein family HMM PF00970.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.476