Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELS17_08830 | ELS17_14020 | GCA_000731985_02446 | GCA_000731985_01520 | Unannotated protein. | Unannotated protein. | 0.703 |
ELS17_08830 | ELS17_18240 | GCA_000731985_02446 | GCA_000731985_02830 | Unannotated protein. | Unannotated protein. | 0.421 |
ELS17_08830 | dph2 | GCA_000731985_02446 | GCA_000731985_03068 | Unannotated protein. | Unannotated protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | 0.661 |
ELS17_08830 | dphB | GCA_000731985_02446 | GCA_000731985_00009 | Unannotated protein. | Unannotated protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 0.650 |
ELS17_08830 | eif1A | GCA_000731985_02446 | GCA_000731985_02056 | Unannotated protein. | Unannotated protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.448 |
ELS17_08830 | pelA | GCA_000731985_02446 | GCA_000731985_02438 | Unannotated protein. | Unannotated protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. | 0.570 |
ELS17_08830 | psmA | GCA_000731985_02446 | GCA_000731985_01306 | Unannotated protein. | Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.495 |
ELS17_14020 | ELS17_08830 | GCA_000731985_01520 | GCA_000731985_02446 | Unannotated protein. | Unannotated protein. | 0.703 |
ELS17_14020 | dph2 | GCA_000731985_01520 | GCA_000731985_03068 | Unannotated protein. | Unannotated protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | 0.659 |
ELS17_14020 | dphB | GCA_000731985_01520 | GCA_000731985_00009 | Unannotated protein. | Unannotated protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 0.703 |
ELS17_14020 | eif1A | GCA_000731985_01520 | GCA_000731985_02056 | Unannotated protein. | Unannotated protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.530 |
ELS17_14020 | fusA | GCA_000731985_01520 | GCA_000731985_03394 | Unannotated protein. | Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.602 |
ELS17_14020 | pelA | GCA_000731985_01520 | GCA_000731985_02438 | Unannotated protein. | Unannotated protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. | 0.517 |
ELS17_14020 | psmA | GCA_000731985_01520 | GCA_000731985_01306 | Unannotated protein. | Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.673 |
ELS17_14020 | rpl19e | GCA_000731985_01520 | GCA_000731985_00137 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.808 |
ELS17_14020 | rps4e | GCA_000731985_01520 | GCA_000731985_00142 | Unannotated protein. | Unannotated protein; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.816 |
ELS17_18240 | ELS17_08830 | GCA_000731985_02830 | GCA_000731985_02446 | Unannotated protein. | Unannotated protein. | 0.421 |
ELS17_18240 | dph2 | GCA_000731985_02830 | GCA_000731985_03068 | Unannotated protein. | Unannotated protein; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | 0.588 |
ELS17_18240 | dphB | GCA_000731985_02830 | GCA_000731985_00009 | Unannotated protein. | Unannotated protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 0.662 |
ELS17_18240 | eif1A | GCA_000731985_02830 | GCA_000731985_02056 | Unannotated protein. | Unannotated protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.454 |
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