STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000731985_00703Unannotated protein. (410 aa)    
Predicted Functional Partners:
glpK
Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.967
ELS17_02625
Unannotated protein.
  
 0.924
ELS17_16025
Unannotated protein.
  
 0.924
psmA
Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 0.910
psmA-2
Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 0.909
rpl40e
Unannotated protein; Belongs to the eukaryotic ribosomal protein eL40 family.
   
  0.887
psmB
Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
 0.881
psmB-2
Unannotated protein; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
 0.881
ELS17_13650
Unannotated protein.
    
 0.824
ELS17_16710
Unannotated protein.
    
 0.824
Your Current Organism:
Natrinema altunense
NCBI taxonomy Id: 222984
Other names: AS 1.3731, JCM 12890, N. altunense, Natrinema aibiensis, Natrinema ajinwuensis, Natrinema altuensis, Natrinema altunense Xu et al. 2005, strain AJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.