Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELS17_02820 | ELS17_16565 | GCA_000731985_00675 | GCA_000731985_02961 | Unannotated protein. | Unannotated protein. | 0.575 |
ELS17_02820 | rpl18 | GCA_000731985_00675 | GCA_000731985_00136 | Unannotated protein. | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.859 |
ELS17_02820 | rpl22 | GCA_000731985_00675 | GCA_000731985_00149 | Unannotated protein. | Unannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.848 |
ELS17_02820 | rpl23 | GCA_000731985_00675 | GCA_000731985_00152 | Unannotated protein. | Unannotated protein; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.820 |
ELS17_02820 | rpl24 | GCA_000731985_00675 | GCA_000731985_00143 | Unannotated protein. | Unannotated protein; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.875 |
ELS17_02820 | rpl3 | GCA_000731985_00675 | GCA_000731985_00154 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.870 |
ELS17_02820 | rpl31e | GCA_000731985_00675 | GCA_000731985_03282 | Unannotated protein. | Unannotated protein; Belongs to the ribosomal protein L31e family. | 0.747 |
ELS17_02820 | rpl32e | GCA_000731985_00675 | GCA_000731985_00138 | Unannotated protein. | Unannotated protein; Belongs to the eukaryotic ribosomal protein eL32 family. | 0.704 |
ELS17_02820 | rpmC | GCA_000731985_00675 | GCA_000731985_00147 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uL29 family. | 0.759 |
ELS17_16560 | ELS17_16565 | GCA_000731985_02960 | GCA_000731985_02961 | Unannotated protein. | Unannotated protein. | 0.624 |
ELS17_16565 | ELS17_02820 | GCA_000731985_02961 | GCA_000731985_00675 | Unannotated protein. | Unannotated protein. | 0.575 |
ELS17_16565 | ELS17_16560 | GCA_000731985_02961 | GCA_000731985_02960 | Unannotated protein. | Unannotated protein. | 0.624 |
ELS17_16565 | rpl18 | GCA_000731985_02961 | GCA_000731985_00136 | Unannotated protein. | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.614 |
ELS17_16565 | rpl22 | GCA_000731985_02961 | GCA_000731985_00149 | Unannotated protein. | Unannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.606 |
ELS17_16565 | rpl23 | GCA_000731985_02961 | GCA_000731985_00152 | Unannotated protein. | Unannotated protein; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.657 |
ELS17_16565 | rpl24 | GCA_000731985_02961 | GCA_000731985_00143 | Unannotated protein. | Unannotated protein; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.617 |
ELS17_16565 | rpl3 | GCA_000731985_02961 | GCA_000731985_00154 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.610 |
ELS17_16565 | rpl31e | GCA_000731985_02961 | GCA_000731985_03282 | Unannotated protein. | Unannotated protein; Belongs to the ribosomal protein L31e family. | 0.544 |
ELS17_16565 | rpl32e | GCA_000731985_02961 | GCA_000731985_00138 | Unannotated protein. | Unannotated protein; Belongs to the eukaryotic ribosomal protein eL32 family. | 0.673 |
ELS17_16565 | rpmC | GCA_000731985_02961 | GCA_000731985_00147 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uL29 family. | 0.544 |
page 1 of 5