Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELS17_00285 | ELS17_00735 | GCA_000731985_00155 | GCA_000731985_03096 | Unannotated protein. | Unannotated protein. | 0.764 |
ELS17_00285 | ELS17_09405 | GCA_000731985_00155 | GCA_000731985_00860 | Unannotated protein. | Unannotated protein. | 0.576 |
ELS17_00285 | rpl7ae | GCA_000731985_00155 | GCA_000731985_02924 | Unannotated protein. | Unannotated protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.416 |
ELS17_00285 | srp19 | GCA_000731985_00155 | GCA_000731985_03097 | Unannotated protein. | Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. | 0.488 |
ELS17_00285 | tmcA | GCA_000731985_00155 | GCA_000731985_02926 | Unannotated protein. | Unannotated protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.626 |
ELS17_00285 | truB | GCA_000731985_00155 | GCA_000731985_00120 | Unannotated protein. | Unannotated protein; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.801 |
ELS17_00735 | ELS17_00285 | GCA_000731985_03096 | GCA_000731985_00155 | Unannotated protein. | Unannotated protein. | 0.764 |
ELS17_00735 | ELS17_08620 | GCA_000731985_03096 | GCA_000731985_03644 | Unannotated protein. | Unannotated protein. | 0.916 |
ELS17_00735 | ELS17_09405 | GCA_000731985_03096 | GCA_000731985_00860 | Unannotated protein. | Unannotated protein. | 0.683 |
ELS17_00735 | guaA | GCA_000731985_03096 | GCA_000731985_00768 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.751 |
ELS17_00735 | nop10 | GCA_000731985_03096 | GCA_000731985_02601 | Unannotated protein. | Unannotated protein; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. | 0.999 |
ELS17_00735 | pyrG | GCA_000731985_03096 | GCA_000731985_00767 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.693 |
ELS17_00735 | rpl7ae | GCA_000731985_03096 | GCA_000731985_02924 | Unannotated protein. | Unannotated protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.999 |
ELS17_00735 | srp19 | GCA_000731985_03096 | GCA_000731985_03097 | Unannotated protein. | Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. | 0.810 |
ELS17_00735 | tmcA | GCA_000731985_03096 | GCA_000731985_02926 | Unannotated protein. | Unannotated protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.708 |
ELS17_00735 | truB | GCA_000731985_03096 | GCA_000731985_00120 | Unannotated protein. | Unannotated protein; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.999 |
ELS17_08620 | ELS17_00735 | GCA_000731985_03644 | GCA_000731985_03096 | Unannotated protein. | Unannotated protein. | 0.916 |
ELS17_08620 | ELS17_09405 | GCA_000731985_03644 | GCA_000731985_00860 | Unannotated protein. | Unannotated protein. | 0.982 |
ELS17_08620 | guaA | GCA_000731985_03644 | GCA_000731985_00768 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.817 |
ELS17_08620 | nop10 | GCA_000731985_03644 | GCA_000731985_02601 | Unannotated protein. | Unannotated protein; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. | 0.557 |
page 1 of 4