STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rocF-2Unannotated protein; Belongs to the arginase family. (318 aa)    
Predicted Functional Partners:
argF
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
   
 0.771
ELS17_06395
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.762
argH
Unannotated protein.
     
 0.746
hutI
Unannotated protein; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
 
 0.662
hutH
Unannotated protein.
  
  
 0.635
hutG
Unannotated protein; Belongs to the arginase family.
  
     0.624
ELS17_18315
Unannotated protein.
 
 
 0.618
ELS17_01930
Unannotated protein.
  
 
 0.606
GCA_000731985_03305
Unannotated protein.
  
 
 0.606
carB
Unannotated protein; Belongs to the CarB family.
  
 
 0.560
Your Current Organism:
Natrinema altunense
NCBI taxonomy Id: 222984
Other names: AS 1.3731, JCM 12890, N. altunense, Natrinema aibiensis, Natrinema ajinwuensis, Natrinema altuensis, Natrinema altunense Xu et al. 2005, strain AJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.