STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS17_09645Unannotated protein. (518 aa)    
Predicted Functional Partners:
ELS17_11805
Unannotated protein.
     
 0.844
ELS17_12795
Unannotated protein.
    
  0.843
ELS17_11360
Unannotated protein.
    
  0.769
ELS17_09640
Unannotated protein.
    
 0.754
acs-2
Unannotated protein.
     
 0.711
ELS17_05675
Unannotated protein; Belongs to the LDH/MDH superfamily.
     
 0.703
acs
Unannotated protein.
     
 0.701
fni
Unannotated protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.693
ELS17_11800
Unannotated protein.
     
 0.692
ELS17_11465
Unannotated protein.
    
 0.669
Your Current Organism:
Natrinema altunense
NCBI taxonomy Id: 222984
Other names: AS 1.3731, JCM 12890, N. altunense, Natrinema aibiensis, Natrinema ajinwuensis, Natrinema altuensis, Natrinema altunense Xu et al. 2005, strain AJ2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.