Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AS25_01205Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
AS25_02445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
AS25_07675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
AS25_01360
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.482
AS25_00705
Taurine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
AS25_01305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.463
AS25_01215
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.463
AS25_01220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0336 family.
  
    0.463
AS25_12975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
AS25_11735
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
  
     0.427
Your Current Organism:
Kocuria marina
NCBI taxonomy Id: 223184
Other names: CCUG 51442, JCM 13363, KCTC 9943, KMM 3905, Kocuria marina Kim et al. 2004, Kocuria sp. KMM 3905
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