Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AS25_01595Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
AS25_01600
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
AS25_13175
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.943
AS25_11625
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
AS25_00055
PhoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.928
AS25_05570
PhoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.927
AS25_07210
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.926
AS25_01170
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.859
AS25_07555
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.847
kgd
Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.803
AS25_13655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.778
Your Current Organism:
Kocuria marina
NCBI taxonomy Id: 223184
Other names: CCUG 51442, JCM 13363, KCTC 9943, KMM 3905, Kocuria marina Kim et al. 2004, Kocuria sp. KMM 3905
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