STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS25_03415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)    
Predicted Functional Partners:
AS25_06370
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.855
AS25_09775
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.802
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.616
AS25_06835
Amidoligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.514
AS25_07465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.513
AS25_03305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.473
AS25_08965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
AS25_03420
Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
    0.421
AS25_11940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
   0.410
Your Current Organism:
Kocuria marina
NCBI taxonomy Id: 223184
Other names: CCUG 51442, JCM 13363, KCTC 9943, KMM 3905, Kocuria marina Kim et al. 2004, Kocuria sp. KMM 3905
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.