STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS25_04425Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
AS25_04420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.959
AS25_07145
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.915
AS25_07815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.915
AS25_11095
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.915
AS25_00350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.677
AS25_01095
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
AS25_04415
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
AS25_07675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
AS25_09455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
AS25_07960
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.484
Your Current Organism:
Kocuria marina
NCBI taxonomy Id: 223184
Other names: CCUG 51442, JCM 13363, KCTC 9943, KMM 3905, Kocuria marina Kim et al. 2004, Kocuria sp. KMM 3905
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.