Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAO53578.1 | AAO53579.1 | PSPTO_0022 | PSPTO_0023 | DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381. | Hypothetical protein; Identified by Glimmer2; putative. | 0.794 |
AAO53578.1 | recA | PSPTO_0022 | PSPTO_4033 | DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.460 |
AAO53579.1 | AAO53578.1 | PSPTO_0023 | PSPTO_0022 | Hypothetical protein; Identified by Glimmer2; putative. | DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381. | 0.794 |
recA | AAO53578.1 | PSPTO_4033 | PSPTO_0022 | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01381. | 0.460 |