glnA-1 protein (Pseudomonas syringae tomato)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

glnA-1

Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. (468 aa)

Predicted Functional Partners:

gltB

0.963

AAO58445.1

0.959

carA

0.925

gltD

0.922

carB

0.918

AAO57226.1

0.917

glsA

0.916

glmS

0.914

AAO55816.1

0.907

nirB

0.907

Your Current Organism:

Pseudomonas syringae tomato

NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAO55816.1	AAO57226.1	PSPTO_2302	PSPTO_3757	Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	0.905
AAO55816.1	glnA-1	PSPTO_2302	PSPTO_0359	Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.907
AAO55816.1	gltB	PSPTO_2302	PSPTO_5123	Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.	Glutamate synthase, large subunit; See PMID:20190049 for expression data.	0.569
AAO55816.1	nirB	PSPTO_2302	PSPTO_3262	Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.	Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.917
AAO57226.1	AAO55816.1	PSPTO_3757	PSPTO_2302	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative.	0.905
AAO57226.1	AAO58445.1	PSPTO_3757	PSPTO_5017	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	0.909
AAO57226.1	glnA-1	PSPTO_3757	PSPTO_0359	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.917
AAO57226.1	glsA	PSPTO_3757	PSPTO_2488	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Glutaminase, putative; Similar to SP:P77470, SP:P37828, and PID:901847; identified by sequence similarity; putative; Belongs to the glutaminase family.	0.900
AAO57226.1	gltB	PSPTO_3757	PSPTO_5123	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Glutamate synthase, large subunit; See PMID:20190049 for expression data.	0.962
AAO57226.1	gltD	PSPTO_3757	PSPTO_5121	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Glutamate synthase, small subunit; See PMID:20190049 for expression data.	0.918
AAO57226.1	nirB	PSPTO_3757	PSPTO_3262	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.905
AAO58445.1	AAO57226.1	PSPTO_5017	PSPTO_3757	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.	0.909
AAO58445.1	glnA-1	PSPTO_5017	PSPTO_0359	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.959
AAO58445.1	glsA	PSPTO_5017	PSPTO_2488	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutaminase, putative; Similar to SP:P77470, SP:P37828, and PID:901847; identified by sequence similarity; putative; Belongs to the glutaminase family.	0.910
AAO58445.1	gltB	PSPTO_5017	PSPTO_5123	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase, large subunit; See PMID:20190049 for expression data.	0.968
AAO58445.1	gltD	PSPTO_5017	PSPTO_5121	Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase, small subunit; See PMID:20190049 for expression data.	0.902
carA	carB	PSPTO_4502	PSPTO_4501	Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.	Carbamoyl-phosphate synthase, large subunit; See PMID:20190049 for expression data.	0.999
carA	glmS	PSPTO_4502	PSPTO_5595	Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.	Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.	0.931
carA	glnA-1	PSPTO_4502	PSPTO_0359	Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.925
carA	glsA	PSPTO_4502	PSPTO_2488	Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.	Glutaminase, putative; Similar to SP:P77470, SP:P37828, and PID:901847; identified by sequence similarity; putative; Belongs to the glutaminase family.	0.900

page 1 of 4

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About