Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO53941.1Iron-sulfur cluster-binding protein. (669 aa)    
Predicted Functional Partners:
AAO53940.1
NADH:flavin oxidoreductase/NADH oxidase family protein.
 
 
 0.998
etfA-1
Electron transfer flavoprotein, alpha subunit.
 
 
 0.996
etfB-1
Electron transfer flavoprotein, beta subunit.
 
 
 0.996
AAO53946.1
Iron-sulfur cluster-binding protein; Similar to GP:15073802; identified by sequence similarity; putative.
 
 
 0.994
AAO53945.1
Iron-sulfur cluster-binding protein, Rieske family; Identified by match to PFAM protein family HMM PF00848.
 
 
 0.982
AAO53939.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.975
AAO56551.1
Iron-sulfur cluster-binding protein, rieske family; Similar to GP:15155696; identified by sequence similarity; putative.
 
 
 0.973
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.909
glyA-1
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.908
AAO55936.1
Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative.
   
 
 0.908
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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