Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
srkAConserved protein of unknown function; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. (324 aa)    
Predicted Functional Partners:
AAO54036.1
Molybdate transport regulator ModE, putative.
     
 0.757
rarD-1
rarD protein.
       0.752
AAO54037.1
Competence protein ComF, putative.
  
    0.556
AAO54035.1
Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to TIGR protein family HMM TIGR01409.
       0.533
bioB
Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.531
AAO54031.1
ABC transporter, permease protein.
       0.506
AAO54032.1
ABC transporter, permease protein.
       0.506
AAO54029.1
Transcriptional repressor, LacI family; Similar to GP:290603, and SP:P25551; identified by sequence similarity; putative.
       0.497
AAO54030.1
ABC transporter, periplasmic substrate-binding protein.
       0.497
AAO54033.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.497
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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