Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54030.1ABC transporter, periplasmic substrate-binding protein. (333 aa)    
Predicted Functional Partners:
AAO54031.1
ABC transporter, permease protein.
 
     0.952
AAO54032.1
ABC transporter, permease protein.
 
     0.949
cpdA
Ser/Thr protein phosphatase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.906
AAO54029.1
Transcriptional repressor, LacI family; Similar to GP:290603, and SP:P25551; identified by sequence similarity; putative.
 
   
 0.862
AAO57345.1
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.858
AAO54033.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.838
AAO57346.1
Polyamine ABC transporter, permease protein, putative.
 
  
 0.821
AAO57347.1
Polyamine ABC transporter, permease protein, putative.
 
   
 0.771
AAO57348.1
Polyamine ABC transporter, ATP-binding protein, putative; Belongs to the ABC transporter superfamily.
 
  
 0.549
AAO53860.1
Iron ABC transporter, permease protein.
  
  
 0.542
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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