Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54032.1ABC transporter, permease protein. (264 aa)    
Predicted Functional Partners:
AAO54030.1
ABC transporter, periplasmic substrate-binding protein.
 
     0.949
AAO54033.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.921
cpdA
Ser/Thr protein phosphatase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.883
AAO54031.1
ABC transporter, permease protein.
 
    
0.878
AAO54029.1
Transcriptional repressor, LacI family; Similar to GP:290603, and SP:P25551; identified by sequence similarity; putative.
 
   
 0.865
ugpC
Glycerol-3-phosphate ABC transporter, ATP-binding protein; Similar to GP:15160309, and SP:P10907; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 0.644
malK
Maltose/maltodextrin ABC transporter, ATP-binding protein.
 
 
 0.638
gltK
Glucose ABC transporter, ATP-binding protein; See PMID:20190049 for expression data; Belongs to the ABC transporter superfamily.
 
 
 0.615
ugpB
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; Similar to GP:15160312, and SP:P10904; identified by sequence similarity; putative.
 
 
 0.596
AAO57208.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.557
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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