Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54062.1Transcriptional regulator, AsnC family; See PMID:20190049 for expression data. (146 aa)    
Predicted Functional Partners:
AAO53807.1
Transcriptional regulator, AsnC family; See PMID:20190049 for expression data; similar to SP:P37403; identified by sequence similarity; putative.
  
     0.752
AAO53866.1
Transcriptional regulator, AsnC family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01199.
  
    0.752
AAO57971.1
Transcriptional regulator, AsnC family; Identified by match to PFAM protein family HMM PF01037.
  
     0.749
AAO56642.1
Transcriptional regulator, AsnC family; Identified by match to PFAM protein family HMM PF01037.
  
     0.744
AAO53819.1
Transcriptional regulator, AsnC family; Similar to GP:15074813; identified by sequence similarity; putative.
  
     0.743
AAO58223.1
Transcriptional regulator, AsnC family; See PMID:20190049 for expression data.
  
     0.736
AAO54061.1
Tryptophan 2-monooxygenase, putative; See PMID:20190049 for expression data.
       0.725
AAO54063.1
Membrane protein, putative; See PMID:20190049 for expression data; similar to GP:17430601; identified by sequence similarity; putative.
       0.675
AAO54060.1
Hydrolase, carbon-nitrogen family.
 
     0.523
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
   
 0.401
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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