Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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metC-1Cystathionine beta-lyase; See PMID:20190049 for expression data; similar to SP:P06721; identified by sequence similarity; putative. (388 aa)    
Predicted Functional Partners:
AAO55939.1
Pyridoxal-phosphate dependent enzyme family protein; Identified by match to TIGR protein family HMM TIGR01274.
 
 0.979
cysK
Cysteine synthase A; See PMID:20190049 for expression data; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.975
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.964
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.945
AAO56135.1
Rhodanese domain protein/cystathionine beta-lyase; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00858.
 
 
0.929
AAO53964.1
Rhodanese-like domain protein; See PMID:20190049 for expression data; similar to GP:2661707; identified by sequence similarity; putative.
  
 
 0.923
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
  
 
0.922
aspB
Aspartate aminotransferase; Similar to SP:P53001; identified by sequence similarity; putative.
  
 
 0.916
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.915
metC-2
Cystathionine beta-lyase; Similar to SP:P06721; identified by sequence similarity; putative.
  
  
 
0.909
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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