Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54247.1O-antigen ABC transporter, ATP-binding protein. (234 aa)    
Predicted Functional Partners:
AAO54246.1
O-antigen ABC transporter, permease protein, putative.
 
 0.999
AAO54605.1
O-antigen ABC transporter, permease protein, putative; See PMID:20190049 for expression data; similar to GP:13518097, and GP:2828671; identified by sequence similarity; putative.
 
 0.993
AAO54604.1
O-antigen ABC transporter, ATP-binding protein, putative; See PMID:20190049 for expression data; similar to GP:3142220, GB:X04409, GB:X56009, GB:M21139, GB:M21740, GB:M21140, GB:M21741, GB:M21141, GB:M21142, GB:X04408, GB:X07036, GB:M14631, GB:U12466, SP:P04895, PID:31913, PID:386745, PID:386746, and PID:527671; identified by sequence similarity; putative.
  
  
 
0.906
AAO54603.1
Glycosyl transferase, group 2 family protein; See PMID:20190049 for expression data; similar to SP:P29202, and PID:148782; identified by sequence similarity; putative.
 
  
 0.769
AAO55465.1
Glycosyl transferase, group 2 family protein; See PMID:20190049 for expression data; similar to GP:13183748; identified by sequence similarity; putative.
 
  
 0.692
AAO55436.1
See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00535.
 
  
 0.651
AAO55464.1
See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00535.
 
  
 0.619
AAO56925.1
Capsular polysaccharide biosynthesis protein; Similar to GP:4512005, and SP:Q46629; identified by sequence similarity; putative.
  
  
 0.604
AAO57006.1
Lipoprotein PslD; See PMID:20190049 for expression data.
  
  
 0.604
AAO54248.1
Lipopolysaccharide biosynthesis protein, putative; Similar to GP:13274368, and GP:13274368; identified by sequence similarity; putative.
     
 0.583
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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