Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
AAO54283.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (101 aa)    
Predicted Functional Partners:
smtA
smtA protein; See PMID:20190049 for expression data.
  
    0.788
AAO54281.1
Lipoprotein, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00034.
       0.606
birA
birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.568
AAO57044.1
Acetyltransferase, GNAT family; See PMID:20190049 for expression data; similar to GB:K03474, GB:A18521, SP:P03971, PID:386953, and PID:512453; identified by sequence similarity; putative.
       0.526
AAO54284.1
MaoC-like domain protein.
       0.522
AAO54280.1
Lipoprotein, putative; See PMID:20190049 for expression data.
       0.501
AAO54285.1
Oxidoreductase, short chain dehydrogenase/reductase family.
       0.461
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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