Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54286.1Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)    
Predicted Functional Partners:
fadB
Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
 0.999
AAO57324.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data; similar to GP:4902957, and GP:4902957; identified by sequence similarity; putative.
 
 0.971
AAO54285.1
Oxidoreductase, short chain dehydrogenase/reductase family.
 
 0.969
AAO56246.1
acyl-CoA dehydrogenase family protein; See PMID:20190049 for expression data.
  
 0.943
AAO56931.1
3-oxoacid CoA-transferase, subunit B family; See PMID:20190049 for expression data.
  
 
 0.934
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.931
gltA
Citrate synthase I; Similar to PIR:A33596; identified by sequence similarity; putative; Belongs to the citrate synthase family.
  
 0.930
prpC
2-methylcitrate synthase; See PMID:20190049 for expression data; Belongs to the citrate synthase family.
  
 0.930
acs
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.929
mvaB
hydroxymethylglutaryl-CoA lyase; See PMID:20190049 for expression data; similar to SP:P13703, GB:M63959, GB:U06976, SP:P30533, PID:1235526, PID:177874, and PID:463882; identified by sequence similarity; putative.
  
 
 0.928
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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