Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54313.1Transcriptional regulator, TetR family. (218 aa)    
Predicted Functional Partners:
AAO54312.1
Conserved hypothetical protein.
       0.725
AAO54314.1
Xanthine/uracil permease family protein; Similar to SP:P42086; identified by sequence similarity; putative.
 
     0.606
AAO57139.1
Membrane protein, putative; Similar to GP:9947470; identified by sequence similarity; putative.
 
     0.534
AAO57135.1
Polysaccharide deacetylase family protein; See PMID:20190049 for expression data.
  
     0.497
guaD
Guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.478
AAO54315.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
 
   0.467
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
  
     0.464
AAO57131.1
Xanthine dehydrogenase accessory factor XdhC, putative; See PMID:20190049 for expression data.
 
     0.441
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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