Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54333.1Phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative; Similar to GP:3127078, and SP:P16682; identified by sequence similarity; putative. (283 aa)    
Predicted Functional Partners:
AAO54330.1
Phosphonate ABC transporter, permease protein, putative; Similar to SP:P16683; identified by sequence similarity; putative.
 
 
 0.998
phnC1
Phosphonate ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.998
AAO54331.1
Phosphonate ABC transporter, permease protein, putative.
 
 
 0.997
phnC
Phosphonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.967
phnE
Phosphonates ABC transporter, permease protein; Similar to SP:P16683; identified by sequence similarity; putative.
 
 
 0.960
phnD
Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682, GB:L02932, GB:Y07619, SP:Q07869, PID:1514595, PID:1526972, and PID:307341; identified by sequence similarity; putative.
 
  
 
0.929
phnJ
Phosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.697
selU
Conserved hypothetical protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.
 
     0.644
AAO56247.1
OmpA family protein; Identified by match to TIGR protein family HMM TIGR01352.
  
  
 0.635
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
     0.615
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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