Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO54469.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer. (377 aa)    
Predicted Functional Partners:
AAO54471.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:15978392, and GP:15978392; identified by sequence similarity; putative.
  
 0.996
AAO54472.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:15978391, and GP:15978391; identified by sequence similarity; putative.
 
   
 0.975
AAO54470.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:21467316; identified by sequence similarity; putative.
 
    0.974
terA
Tellurium resistance protein TerA; See PMID:20190049 for expression data; similar to GP:5702379; identified by sequence similarity; putative.
 
     0.901
AAO54467.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02786.
 
    0.898
terZ
Tellurium resistance protein TerZ; Similar to SP:Q52353; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:Q52353, identified by sequence similarity, putative.
 
     0.897
terB
Tellurium resistance protein TerB; See PMID:20190049 for expression data; similar to GP:5702380, GB:U11791, SP:P51946, PID:532561, and PID:536920; identified by sequence similarity; putative.
 
     0.880
terD
Tellurium resistance protein TerD; Similar to SP:P18781; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P18781, identified by sequence similarity, putative.
 
     0.870
terE
Tellurium resistance protein TerE; Similar to SP:P18782; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P1878, identified by sequence similarity, putative.
 
     0.860
AAO54473.1
HAD-superfamily hydrolase; See PMID:20190049 for expression data; similar to SP:O87707; identified by sequence similarity; putative.
 
    0.830
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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