Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54510.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9950959; identified by sequence similarity; putative. (512 aa)    
Predicted Functional Partners:
AAO54509.1
Pentapeptide repeat domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00805.
       0.766
AAO54512.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9950957, and GP:9950957; identified by sequence similarity; putative.
 
     0.659
AAO54511.1
Penicillin-binding protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
       0.629
AAO54513.1
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF04287.
       0.613
nrdA
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.594
AAO56995.1
Universal stress protein family; See PMID:20190049 for expression data; similar to GB:S54005, GB:M20259, GB:M92381, SP:P13472, PID:339661, PID:339687, and PID:339697; identified by sequence similarity; putative.
 
  
 0.581
AAO54101.1
Sensory box histidine kinase.
  
  
 0.572
AAO54250.1
HAD-superfamily hydrolase; Identified by match to TIGR protein family HMM TIGR01422.
  
    0.533
AAO54376.1
Conserved domain protein; Also known as ORF24 (PMID12032338; Petnicki-Ocwieja et al, 2002); see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01449.
  
    0.533
AAO55631.1
Conserved hypothetical protein.
  
    0.533
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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