Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AAO54523.1Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF04288. (235 aa)    
Predicted Functional Partners:
AAO54524.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
 
    0.977
AAO54522.1
Conserved protein of unknown function; See PMID:20190049 for expression data.
 
     0.971
AAO58382.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.771
AAO55013.1
Leucine-rich repeat domain protein; Identified by match to PFAM protein family HMM PF02866.
  
     0.770
AAO56283.1
Identified by match to PFAM protein family HMM PF00580.
  
     0.767
AAO54525.1
Conserved hypothetical protein.
 
     0.765
AAO57549.1
Leucine rich repeat domain protein; Identified by match to PFAM protein family HMM PF00560.
  
     0.756
AAO55767.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
     0.731
AAO58221.1
Conserved protein of unknown function; This appears to be a fusion of two full length hypothetical proteins.One is found in Synechocystis sp. and the other in Saccharomyces cerevisiae; see PMID:20190049 for expression data; similar to GP:1122338; identified by sequence similarity; putative.
  
     0.731
AAO54122.1
Tail tape measure protein; Similar to GP:18152378; identified by sequence similarity; putative.
  
     0.730
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.