Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO54545.1TonB system transport protein. (135 aa)    
Predicted Functional Partners:
AAO54546.1
tonB domain protein.
  
 
 0.908
AAO54554.1
MotA/TolQ/ExbB proton channel family protein; Identified by match to PFAM protein family HMM PF01618.
 
 
 0.862
AAO54547.1
TonB-dependent receptor, putative; Identified by match to TIGR protein family HMM TIGR01783.
  
  
 0.821
tolQ-1
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.702
exbB-2
TonB system transport protein ExbB; Similar to GP:3916254; identified by sequence similarity; putative.
 
 
 0.685
AAO53816.1
Biopolymer transport protein ExbB, putative; Similar to SP:O34260, and SP:P18783; identified by sequence similarity; putative.
 
 
 0.684
exbB-1
TonB system transport protein ExbB; Similar to GP:14595284; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:14595284, identified by sequence similarity, putative.
 
 
 0.679
exbB-3
TonB system transport protein ExbB.
 
 
 0.675
AAO57314.1
MotA/TolQ/ExbB proton channel family protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01618.
 
 
 0.674
tolQ-2
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.669
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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