Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
eda-14-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate; See PMID:20190049 for expression data. (224 aa)    
Predicted Functional Partners:
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.998
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
  
 0.993
glk
Glucokinase; See PMID:20190049 for expression data; Belongs to the bacterial glucokinase family.
 
 
 0.987
kdgK
2-dehydro-3-deoxygluconokinase; See PMID:20190049 for expression data; similar to SP:P37647, GB:Y00318, SP:P05156, PID:1335054, PID:1335055, PID:1335056, and PID:182607; identified by sequence similarity; putative.
 
 
 0.965
gap-1
Glyceraldehyde 3-phosphate dehydrogenase, type I; See PMID:20190049 for expression data; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.959
zwf-1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.945
pyk
Pyruvate kinase; Identified by match to PFAM protein family HMM PF02887; Belongs to the pyruvate kinase family.
    
 0.925
aceA
Isocitrate lyase.
     
 0.906
glcD
Glycolate oxidase, subunit GlcD; Similar to SP:P52075, SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative.
   
 
 0.905
glcE
Glycolate oxidase, subunit GlcE.
   
 
 0.905
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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