Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55205.1Conserved hypothetical protein. (223 aa)    
Predicted Functional Partners:
ttcA
Conserved protein of unknown function; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
  
  
 0.839
arsC
Arsenate reductase.
       0.685
AAO58898.1
Transporter, putative; See PMID:20190049 for expression data.
     
 0.639
tadA
Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.636
wrbA
Trp repressor binding protein; Belongs to the WrbA family.
       0.620
tag
DNA-3-methyladenine glycosidase I; See PMID:20190049 for expression data; similar to SP:P05100; identified by sequence similarity; putative.
  
   
 0.581
AAO55225.1
NLP/P60 family protein; See PMID:20190049 for expression data.
       0.533
AAO55226.1
Lipoprotein, putative.
       0.533
AAO55208.1
Thioredoxin, putative; See PMID:20190049 for expression data.
       0.485
ada
Ada regulatory protein; Similar to GP:14348601, and SP:P06134; identified by sequence similarity; putative.
 
   
 0.425
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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