STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55320.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:15426131; identified by sequence similarity; putative. (103 aa)    
Predicted Functional Partners:
AAO53857.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:5091483, and GP:5091483; identified by sequence similarity; putative.
  
     0.717
AAO56581.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:17134544, and GP:17134544; identified by sequence similarity; putative.
  
     0.495
AAO55792.1
Universal stress protein family; See PMID:20190049 for expression data.
   
    0.447
AAO57169.1
Oxidoreductase, aldo/keto reductase family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01293.
   
    0.420
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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