Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAO55336.1Aromatic amino acid permease; Similar to SP:P15993; identified by sequence similarity; putative. (469 aa)    
Predicted Functional Partners:
AAO55337.1
peptidyl-tRNA hydrolase domain protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00472.
       0.830
AAO55335.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.778
rluB
Ribosomal large subunit pseudouridine synthase B; Identified by similarity to SP:P37765; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.
  
    0.658
coq7
Conserved protein of unknown function; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
      
 0.636
AAO57564.1
High-affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; Similar to SP:P04816, and SP:P21175; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P04816, and SP:P21175, identified by sequence similarity, putative.
      
 0.509
AAO55435.1
Major facilitator family transporter; See PMID:20190049 for expression data; similar to SP:P25744, GB:L19760, SP:P13795, SP:P36974, and PID:307426; identified by sequence similarity; putative.
  
     0.501
hutI
Imidazolonepropionase; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00857; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
  
 0.440
AAO54488.1
Phosphoenolpyruvate-protein phosphotransferase,EI/HPr/EIIA components; See PMID:20190049 for expression data; Belongs to the PEP-utilizing enzyme family.
      
 0.404
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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