STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO55346.1Arginine/ornithine ABC transporter, permease protein; See PMID:20190049 for expression data. (229 aa)    
Predicted Functional Partners:
AAO55345.1
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein; See PMID:20190049 for expression data.
 0.990
hisP
Histidine ABC transporter, ATP-binding protein; See PMID:20190049 for expression data.
 
 
 0.989
AAO55347.1
Arginine/ornithine ABC transporter, permease protein.
 
 
0.987
AAO58606.1
Cystine ABC transporter, periplasmic cystine binding protein; See PMID:20190049 for expression data.
 
 0.856
AAO57596.1
Amino acid ABC transporter, ATP-binding protein.
 
  
 0.837
AAO58782.1
Amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01188.
 
  
 0.837
AAO58783.1
Amino acid ABC transporter, periplasmic amino acid-binding protein; See PMID:20190049 for expression data.
 
 0.835
AAO57592.1
Amino acid ABC transporter, periplasmic amino acid-binding protein; See PMID:20190049 for expression data; Belongs to the bacterial solute-binding protein 3 family.
 
 0.805
AAO55348.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by Glimmer.
  
    0.801
AAO54663.1
Amino acid ABC transporter, periplasmic amino acid-binding protein; See PMID:20190049 for expression data; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.789
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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